PIWI-interacting RNA (piRNA) Database - piRNAdb

piRNA database logo
Show Menu
  • Home
  • About
  • Browse
  • Search
  • Download
  • FAQ/Help
  • Contact
  • piRNA DB
  • home

BROWSE

  • piRNA
  • Dataset
  • Cluster

FILTERS

  • Results per Page
  • Organism

Browse Clusters

925 Results

Here is provided the full list of all piRNA clusters stored on piRNAdb. We use the methodology of sliding window with all piRNAs that had unique aligments to the specific genome. We like to clarify that we are on a update proccess to use a better and new methodology that uses sliding windows, but also uses information about the amount of expression of each piRNAs to produce this cluster list.
Accessing any item, you will be redirected to the choosen cluster information, including ordinary statisthics, authors, amount of piRNA associated. It is also provided a list with as piRNAs associated to the cluster and their links.
You are able to choose how many itens do you want to display in each page on the selection box of "Filter" section. In the same section, you could choose to display only itens from one specific organism of interest.
To get more information about the identification criteria, methodology and parameters that we used, access the specific page "About", item: Cluster Criteria.

On the page "Downloads" we provide a text file with all cluster information.

Display More Information...

Code Localization Direction Build Code
hsa-clu-348 7:6584958...6589826 uni-directional hg38
rno-clu-135 7:18512266...18518869 uni-directional rn6
rno-clu-36 7:20226164...20251144 uni-directional rn6
rno-clu-38 7:20394103...20396042 uni-directional rn6
rno-clu-39 7:22995875...23010813 uni-directional rn6
hsa-clu-349 7:29640666...29650855 uni-directional hg38
mmu-clu-30 7:30133380...30140670 uni-directional mm10
mmu-clu-31 7:52889412...52913377 uni-directional mm10
hsa-clu-350 7:66377592...66391620 uni-directional hg38
mmu-clu-133 7:69878822...69954054 bi-directional mm10
mmu-clu-135 7:73096412...73105100 uni-directional mm10
mmu-clu-34 7:73105374...73151416 uni-directional mm10
mmu-clu-136 7:73771689...73847970 bi-directional mm10
mmu-clu-137 7:75774662...75779471 uni-directional mm10
hsa-clu-351 7:76057751...76075000 uni-directional hg38
rno-clu-136 7:97844634...97872443 uni-directional rn6
rno-clu-138 7:99535012...99594802 bi-directional rn6
rno-clu-42 7:115874499...115895444 uni-directional rn6
hsa-clu-352 7:118218426...118224175 uni-directional hg38
rno-clu-139 7:119838428...119892638 uni-directional rn6
  • 47 Pages
  • Go To:
  • First
  • <<
  • 18
  • 19
  • 20
  • 21
  • 22
  • 23
  • 24
  • >>
  • Last

piRNA Database version 1.8.0

MOC - Molecular Oncology Center

View our cookie data policy