PIWI-interacting RNA (piRNA) Database - piRNAdb

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  • piRNA
  • Dataset
  • Alignment
  • Cluster
  • Genomic Coordinates

Download piRNA Cluster List

We provide files containing information about all clusters found on piRNAdb. Clusters are separated by genome build code and contains ordinary information about the cluster.
To get more information about the identification criteria, methodology and parameters that we used, access the specific page "About", item: Cluster Criteria
Text files separated by tabs and containing a header about each column.
Files compressed in Zip and Gzip format, however both have the same information. This option is available to make it easier to download and use for people who are not familiar to linux based system.

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Organism File Size Format
Homo sapiens hg38 Cluster - v1.7.6 3 KB ZIP GZIP
Mus musculus mm10 Cluster - v1.7.6 3 KB ZIP GZIP
Rattus norvegicus rn6 Cluster - v1.7.6 2 KB ZIP GZIP
Cricitulus griseus crigri1 Cluster - v1.7.6 6 KB ZIP GZIP
Caenorhabditis elegans ce11 Cluster - v1.7.6 647 B ZIP GZIP
Drosophila melanogaster dm6 Cluster - v1.7.6 837 B ZIP GZIP

Download Older Versions of piRNA Cluster List

Files from old versions of piRNAdb are available below. Pay attention to the version code inside the name of the file.

Organism File Size Format
Homo sapiens hg19 Cluster - v1.7.5 3 KB ZIP GZIP
Homo sapiens hg38 Cluster - v1.7.5 3 KB ZIP GZIP
Mus musculus mm10 Cluster - v1.7.5 3 KB ZIP GZIP
Rattus norvegicus rn6 Cluster - v1.7.5 3 KB ZIP GZIP
Caenorhabditis elegans ce11 Cluster - v1.7.5 6 KB ZIP GZIP
Homo sapiens hg19 Cluster - v1.5.0 3 KB ZIP GZIP
Homo sapiens hg38 Cluster - v1.5.0 3 KB ZIP GZIP

piRNA Database version 1.8.0

MOC - Molecular Oncology Center

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