PIWI-interacting RNA (piRNA) Database - piRNAdb

piRNA database logo
Show Menu
  • Home
  • About
  • Browse
  • Search
  • Download
  • FAQ/Help
  • Contact
  • piRNA DB
  • home

BROWSE

  • piRNA
  • Dataset
  • Cluster

FILTERS

  • Results per Page
  • Organism

Browse Clusters

925 Results

Here is provided the full list of all piRNA clusters stored on piRNAdb. We use the methodology of sliding window with all piRNAs that had unique aligments to the specific genome. We like to clarify that we are on a update proccess to use a better and new methodology that uses sliding windows, but also uses information about the amount of expression of each piRNAs to produce this cluster list.
Accessing any item, you will be redirected to the choosen cluster information, including ordinary statisthics, authors, amount of piRNA associated. It is also provided a list with as piRNAs associated to the cluster and their links.
You are able to choose how many itens do you want to display in each page on the selection box of "Filter" section. In the same section, you could choose to display only itens from one specific organism of interest.
To get more information about the identification criteria, methodology and parameters that we used, access the specific page "About", item: Cluster Criteria.

On the page "Downloads" we provide a text file with all cluster information.

Display More Information...

Code Localization Direction Build Code
cgr-clu-396 JH000665.1:776553...779260 uni-directional crigri1
cgr-clu-397 JH000667.1:877507...892512 bi-directional crigri1
cgr-clu-158 JH000677.1:640140...645456 uni-directional crigri1
cgr-clu-159 JH000678.1:144401...145912 uni-directional crigri1
cgr-clu-398 JH000691.1:191502...198593 uni-directional crigri1
cgr-clu-160 JH000697.1:95431...99840 uni-directional crigri1
cgr-clu-161 JH000697.1:119981...136665 uni-directional crigri1
cgr-clu-399 JH000710.1:281782...288142 uni-directional crigri1
cgr-clu-162 JH000723.1:587899...591253 uni-directional crigri1
cgr-clu-400 JH000726.1:15531...23571 uni-directional crigri1
cgr-clu-401 JH000730.1:15489...21343 uni-directional crigri1
cgr-clu-402 JH000735.1:565534...571554 uni-directional crigri1
cgr-clu-163 JH000739.1:399597...407906 bi-directional crigri1
cgr-clu-164 JH000741.1:153591...156185 uni-directional crigri1
cgr-clu-404 JH000741.1:197473...200529 uni-directional crigri1
cgr-clu-405 JH000753.1:556971...559480 uni-directional crigri1
cgr-clu-406 JH000760.1:547059...550488 uni-directional crigri1
cgr-clu-407 JH000760.1:583733...585927 uni-directional crigri1
cgr-clu-408 JH000762.1:716745...736254 uni-directional crigri1
cgr-clu-409 JH000766.1:462203...471711 uni-directional crigri1
  • 47 Pages
  • Go To:
  • First
  • <<
  • 37
  • 38
  • 39
  • 40
  • 41
  • 42
  • 43
  • >>
  • Last

piRNA Database version 1.8.0

MOC - Molecular Oncology Center

View our cookie data policy