PIWI-interacting RNA (piRNA) Database - piRNAdb

piRNA database logo
Show Menu
  • Home
  • About
  • Browse
  • Search
  • Download
  • FAQ/Help
  • Contact
  • piRNA DB
  • home

BROWSE

  • piRNA
  • Dataset
  • Cluster

FILTERS

  • Results per Page
  • Organism

Browse Clusters

925 Results

Here is provided the full list of all piRNA clusters stored on piRNAdb. We use the methodology of sliding window with all piRNAs that had unique aligments to the specific genome. We like to clarify that we are on a update proccess to use a better and new methodology that uses sliding windows, but also uses information about the amount of expression of each piRNAs to produce this cluster list.
Accessing any item, you will be redirected to the choosen cluster information, including ordinary statisthics, authors, amount of piRNA associated. It is also provided a list with as piRNAs associated to the cluster and their links.
You are able to choose how many itens do you want to display in each page on the selection box of "Filter" section. In the same section, you could choose to display only itens from one specific organism of interest.
To get more information about the identification criteria, methodology and parameters that we used, access the specific page "About", item: Cluster Criteria.

On the page "Downloads" we provide a text file with all cluster information.

Display More Information...

Code Localization Direction Build Code
cgr-clu-291 JH000117.1:630600...634903 bi-directional crigri1
cgr-clu-292 JH000120.1:888681...895627 bi-directional crigri1
cgr-clu-293 JH000120.1:1153580...1157169 bi-directional crigri1
cgr-clu-294 JH000120.1:1264965...1266291 uni-directional crigri1
cgr-clu-59 JH000120.1:1552377...1553186 uni-directional crigri1
cgr-clu-60 JH000120.1:1589545...1594380 bi-directional crigri1
cgr-clu-296 JH000120.1:1747981...1758863 bi-directional crigri1
cgr-clu-297 JH000122.1:417116...440436 bi-directional crigri1
cgr-clu-298 JH000123.1:82691...83393 uni-directional crigri1
cgr-clu-63 JH000123.1:1125138...1131999 uni-directional crigri1
cgr-clu-299 JH000125.1:2470277...2484327 uni-directional crigri1
cgr-clu-64 JH000127.1:2366481...2368630 uni-directional crigri1
cgr-clu-65 JH000131.1:320052...362369 uni-directional crigri1
cgr-clu-68 JH000132.1:2146736...2149151 uni-directional crigri1
cgr-clu-69 JH000132.1:2283277...2289514 uni-directional crigri1
cgr-clu-70 JH000136.1:493392...498005 uni-directional crigri1
cgr-clu-300 JH000136.1:2280272...2291609 bi-directional crigri1
cgr-clu-72 JH000137.1:2385750...2405675 bi-directional crigri1
cgr-clu-73 JH000139.1:217776...228973 uni-directional crigri1
cgr-clu-302 JH000146.1:593742...604186 uni-directional crigri1
  • 47 Pages
  • Go To:
  • First
  • <<
  • 29
  • 30
  • 31
  • 32
  • 33
  • 34
  • 35
  • >>
  • Last

piRNA Database version 1.8.0

MOC - Molecular Oncology Center

View our cookie data policy