PIWI-interacting RNA (piRNA) Database - piRNAdb

piRNA database logo
Show Menu
  • Home
  • About
  • Browse
  • Search
  • Download
  • FAQ/Help
  • Contact
  • piRNA DB
  • home

BROWSE

  • piRNA
  • Dataset
  • Cluster

FILTERS

  • Results per Page
  • Organism

Browse Clusters

925 Results

Here is provided the full list of all piRNA clusters stored on piRNAdb. We use the methodology of sliding window with all piRNAs that had unique aligments to the specific genome. We like to clarify that we are on a update proccess to use a better and new methodology that uses sliding windows, but also uses information about the amount of expression of each piRNAs to produce this cluster list.
Accessing any item, you will be redirected to the choosen cluster information, including ordinary statisthics, authors, amount of piRNA associated. It is also provided a list with as piRNAs associated to the cluster and their links.
You are able to choose how many itens do you want to display in each page on the selection box of "Filter" section. In the same section, you could choose to display only itens from one specific organism of interest.
To get more information about the identification criteria, methodology and parameters that we used, access the specific page "About", item: Cluster Criteria.

On the page "Downloads" we provide a text file with all cluster information.

Display More Information...

Code Localization Direction Build Code
cgr-clu-268 JH000060.1:3386836...3394795 uni-directional crigri1
cgr-clu-31 JH000061.1:2083215...2086210 bi-directional crigri1
cgr-clu-32 JH000061.1:2114918...2118659 uni-directional crigri1
cgr-clu-33 JH000062.1:1133640...1142143 uni-directional crigri1
cgr-clu-34 JH000062.1:1288777...1294498 uni-directional crigri1
cgr-clu-35 JH000062.1:2355436...2359357 uni-directional crigri1
cgr-clu-36 JH000063.1:2080091...2089945 uni-directional crigri1
cgr-clu-37 JH000063.1:2876624...2886914 uni-directional crigri1
cgr-clu-270 JH000064.1:1201704...1209282 bi-directional crigri1
cgr-clu-39 JH000064.1:1837582...1838745 uni-directional crigri1
cgr-clu-271 JH000067.1:1322373...1325599 uni-directional crigri1
cgr-clu-272 JH000067.1:2098609...2100938 uni-directional crigri1
cgr-clu-40 JH000070.1:360633...372252 uni-directional crigri1
cgr-clu-41 JH000071.1:588396...591354 uni-directional crigri1
cgr-clu-273 JH000073.1:1376727...1381838 uni-directional crigri1
cgr-clu-42 JH000073.1:2609783...2615504 uni-directional crigri1
cgr-clu-43 JH000076.1:1768626...1770421 uni-directional crigri1
cgr-clu-274 JH000079.1:1127877...1131685 uni-directional crigri1
cgr-clu-275 JH000079.1:1485748...1497406 bi-directional crigri1
cgr-clu-45 JH000086.1:721714...723756 uni-directional crigri1
  • 47 Pages
  • Go To:
  • First
  • <<
  • 27
  • 28
  • 29
  • 30
  • 31
  • 32
  • 33
  • >>
  • Last

piRNA Database version 1.8.0

MOC - Molecular Oncology Center

View our cookie data policy