We provide files containing information about the genomic coordinates of piRNAs stored on piRNAdb in Gff3 and GTF format to download. Files are separated by genome build code.
To get more information about the methodology and parameters, access the specific page "About", item: GFF3 and GTF
Files compressed in Zip and Gzip format, however both have the same information. This option is available to make it easier to download and use for people who are not familiar to linux based system.
Download piRNA Genome Coordinates Gff3 Gtf List
| Organism | File Size | Format |
|---|---|---|
| Homo sapiens hg38 Gtf - v1.7.6 | 9 MB | ZIP GZIP |
| Homo sapiens hg38 Gff3 - v1.7.6 | 9 MB | ZIP GZIP |
| Mus musculus mm10 Gtf - v1.7.6 | 36 MB | ZIP GZIP |
| Mus musculus mm10 Gff3 - v1.7.6 | 35 MB | ZIP GZIP |
| Rattus norvegicus rn6 Gtf - v1.7.6 | 33 MB | ZIP GZIP |
| Rattus norvegicus rn6 Gff3 - v1.7.6 | 32 MB | ZIP GZIP |
| Caenorhabditis elegans ce11 Gtf - v1.7.6 | 165 KB | ZIP GZIP |
| Caenorhabditis elegans ce11 Gff3 - v1.7.6 | 159 KB | ZIP GZIP |
| Drosophila melanogaster dm6 Gtf - v1.7.6 | 5 MB | ZIP GZIP |
| Drosophila melanogaster dm6 Gff3 - v1.7.6 | 5 MB | ZIP GZIP |
Download Older Versions of piRNA Genome Coordinates Gff3 Gtf List
Files from old versions of piRNAdb are available below. Pay attention to the version code inside the name of the file.
| Organism | File Size | Format |
|---|---|---|
| Homo sapiens hg19 Gtf - v1.7.5 | 9 MB | ZIP GZIP |
| Homo sapiens hg19 Gff3 - v1.7.5 | 9 MB | ZIP GZIP |
| Homo sapiens hg38 Gtf - v1.7.5 | 9 MB | ZIP GZIP |
| Homo sapiens hg38 Gff3 - v1.7.5 | 9 MB | ZIP GZIP |
| Mus musculus mm10 Gtf - v1.7.5 | 36 MB | ZIP GZIP |
| Mus musculus mm10 Gff3 - v1.7.5 | 35 MB | ZIP GZIP |
| Rattus norvegicus rn6 Gtf - v1.7.5 | 31 MB | ZIP GZIP |
| Rattus norvegicus rn6 Gff3 - v1.7.5 | 31 MB | ZIP GZIP |
| Caenorhabditis elegans ce11 Gtf - v1.7.5 | 165 KB | ZIP GZIP |
| Caenorhabditis elegans ce11 Gff3 - v1.7.5 | 159 KB | ZIP GZIP |
| Drosophila melanogaster dm6 Gtf - v1.7.5 | 303 KB | ZIP GZIP |
| Drosophila melanogaster dm6 Gff3 - v1.7.5 | 288 KB | ZIP GZIP |