PIWI-interacting RNA (piRNA) Database - piRNAdb

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Download piRNA Alignments List

We provide text files containing information about all piRNA alignments stored on piRNAdb to download. Alignments are separated by genome build code and also provide the piRNA access code associated.
To get more information about the software and parameters we used, access the specific page "About", item: Mapping piRNA
Text files separated by tabs and containing a header about each column.
Files compressed in Zip and Gzip format, however both have the same information. This option is available to make it easier to download and use for people who are not familiar to linux based system.

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Organism File Size Format
Homo sapiens hg38 Alignments - v1.7.6 8 MB ZIP GZIP
Mus musculus mm10 Alignments - v1.7.6 32 MB ZIP GZIP
Rattus norvegicus rn6 Alignments - v1.7.6 29 MB ZIP GZIP
Caenorhabditis elegans ce11 Alignments - v1.7.6 144 KB ZIP GZIP
Drosophila melanogaster dm6 Alignments - v1.7.6 5 MB ZIP GZIP

Download Older Versions of piRNA Alignments List

Files from old versions of piRNAdb are available below. Pay attention to the version code inside the name of the file.

Organism File Size Format
Homo sapiens hg19 Alignments - v1.7.5 8 MB ZIP GZIP
Homo sapiens hg38 Alignments - v1.7.5 8 MB ZIP GZIP
Mus musculus mm10 Alignments - v1.7.5 32 MB ZIP GZIP
Rattus norvegicus rn6 Alignments - v1.7.5 27 MB ZIP GZIP
Caenorhabditis elegans ce11 Alignments - v1.7.5 144 KB ZIP GZIP
Drosophila melanogaster dm6 Alignments - v1.7.5 266 KB ZIP GZIP
Homo sapiens hg19 Alignments - v1.5.0 8 MB ZIP GZIP
Homo sapiens hg38 Alignments - v1.5.0 8 MB ZIP GZIP

piRNA Database version 1.8.0

MOC - Molecular Oncology Center

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