PIWI-interacting RNA (piRNA) Database - piRNAdb

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piRNA: rno-piR-55906

  • Accession:
  • rno-piR-55906
  • Organism Name:
  • Rattus norvegicus
  • Sequence Length:
  • 28
  • Alignments to rn6:
  • 1
  • Community Agree / Disagree:
  • 0 / 0
  • Community Comments:
  • 0
  • Datasets Found:
  • 1
  • Papers Describing:
  • 1

rno-piR-55906 Sequence
Based on genomic context


TGCAAAGACCCTCTGAGGGTGTTGAGAG

rno-piR-55906 Aliases

In this section we provide all access alias for this piRNA in other databases. It is usual that databases store the same sequences of RNAs, but using different accession codes and identification. The association of a piRNA on our database and on another database is made by the comparison of the base sequence. Now, we have alias for piRNAs stored on the following databases: NCBI, ENA, piRNABank, piRBase, piRNAQuest and RNAdb.

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DQ609980.1 piR-78092 piR-rno-47053 rat_piRNA_58737 URS0000620EE3

No rno-piR-55906 Expression Found to Draw the Box Plot!

None rno-piR-55906 Genomic Feature(s) Found to Draw the Cloud!

None rno-piR-55906 Target Site(s) Found to Draw the Cloud!

None rno-piR-55906 Target Gene Ontology Terms Found!

rno-piR-55906 Feedback

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rno-piR-55906 Dataset

In this section we provide information related to the dataset where this piRNA was found. If there is more than on item available, it means that this piRNA was found in more than one project. It is important to cite and give credits to all the authors that have found this RNA sequence.

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Reference Methods Tissue
16751776 Immunoprecipitation testis

rno-piR-55906 Reference

Provide information related to the published papers that use this piRNA. It is different to the "Dataset" section above because any paper that uses this piRNA, like evaluating the expression, mutation or variation, may be displayed here.

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  • Title
  • A germline-specific class of small RNAs binds mammalian Piwi proteins.
  • Journal
  • Nature - 2006
  • Author
  • Girard A; Sachidanandam R; Hannon GJ; Carmell MA
  • Pubmed
  • 16751776

piRNA Database version 1.8.0

MOC - Molecular Oncology Center

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