PIWI-interacting RNA (piRNA) Database - piRNAdb

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piRNA: rno-piR-54181

  • Accession:
  • rno-piR-54181
  • Organism Name:
  • Rattus norvegicus
  • Sequence Length:
  • 28
  • Alignments to rn6:
  • 1
  • Community Agree / Disagree:
  • 0 / 0
  • Community Comments:
  • 0
  • Datasets Found:
  • 1
  • Papers Describing:
  • 1

rno-piR-54181 Sequence
Based on genomic context


TGCTCAAGACAGGGTCTACGTCTCATTA

rno-piR-54181 Aliases

In this section we provide all access alias for this piRNA in other databases. It is usual that databases store the same sequences of RNAs, but using different accession codes and identification. The association of a piRNA on our database and on another database is made by the comparison of the base sequence. Now, we have alias for piRNAs stored on the following databases: NCBI, ENA, piRNABank, piRBase, piRNAQuest and RNAdb.

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DQ611985.1 piR-80097 piR-rno-48724 rat_piRNA_56732 rno_piR_004624 URS000040213E

No rno-piR-54181 Expression Found to Draw the Box Plot!

None rno-piR-54181 Genomic Feature(s) Found to Draw the Cloud!

None rno-piR-54181 Target Site(s) Found to Draw the Cloud!

None rno-piR-54181 Target Gene Ontology Terms Found!

rno-piR-54181 Feedback

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rno-piR-54181 Dataset

In this section we provide information related to the dataset where this piRNA was found. If there is more than on item available, it means that this piRNA was found in more than one project. It is important to cite and give credits to all the authors that have found this RNA sequence.

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Reference Methods Tissue
16751776 Immunoprecipitation testis

rno-piR-54181 Reference

Provide information related to the published papers that use this piRNA. It is different to the "Dataset" section above because any paper that uses this piRNA, like evaluating the expression, mutation or variation, may be displayed here.

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  • Title
  • A germline-specific class of small RNAs binds mammalian Piwi proteins.
  • Journal
  • Nature - 2006
  • Author
  • Girard A; Sachidanandam R; Hannon GJ; Carmell MA
  • Pubmed
  • 16751776

piRNA Database version 1.8.0

MOC - Molecular Oncology Center

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