PIWI-interacting RNA (piRNA) Database - piRNAdb

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piRNA: rno-piR-53782

  • Accession:
  • rno-piR-53782
  • Organism Name:
  • Rattus norvegicus
  • Sequence Length:
  • 31
  • Alignments to rn6:
  • 1
  • Community Agree / Disagree:
  • 0 / 0
  • Community Comments:
  • 0
  • Datasets Found:
  • 1
  • Papers Describing:
  • 1

rno-piR-53782 Sequence
Based on genomic context


TGCTTGTAGACCCAAGTCTGGGAGGCCAAGC

rno-piR-53782 Aliases

In this section we provide all access alias for this piRNA in other databases. It is usual that databases store the same sequences of RNAs, but using different accession codes and identification. The association of a piRNA on our database and on another database is made by the comparison of the base sequence. Now, we have alias for piRNAs stored on the following databases: NCBI, ENA, piRNABank, piRBase, piRNAQuest and RNAdb.

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DQ612446.1 piR-80558 piR-rno-49209 rat_piRNA_56271 rno_piR_004834 URS00004799BA

No rno-piR-53782 Expression Found to Draw the Box Plot!

None rno-piR-53782 Genomic Feature(s) Found to Draw the Cloud!

None rno-piR-53782 Target Site(s) Found to Draw the Cloud!

None rno-piR-53782 Target Gene Ontology Terms Found!

rno-piR-53782 Feedback

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rno-piR-53782 Dataset

In this section we provide information related to the dataset where this piRNA was found. If there is more than on item available, it means that this piRNA was found in more than one project. It is important to cite and give credits to all the authors that have found this RNA sequence.

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Reference Methods Tissue
16751776 Immunoprecipitation testis

rno-piR-53782 Reference

Provide information related to the published papers that use this piRNA. It is different to the "Dataset" section above because any paper that uses this piRNA, like evaluating the expression, mutation or variation, may be displayed here.

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  • Title
  • A germline-specific class of small RNAs binds mammalian Piwi proteins.
  • Journal
  • Nature - 2006
  • Author
  • Girard A; Sachidanandam R; Hannon GJ; Carmell MA
  • Pubmed
  • 16751776

piRNA Database version 1.8.0

MOC - Molecular Oncology Center

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