PIWI-interacting RNA (piRNA) Database - piRNAdb

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piRNA: rno-piR-49961

  • Accession:
  • rno-piR-49961
  • Organism Name:
  • Rattus norvegicus
  • Sequence Length:
  • 29
  • Alignments to rn6:
  • 1
  • Community Agree / Disagree:
  • 0 / 0
  • Community Comments:
  • 0
  • Datasets Found:
  • 1
  • Papers Describing:
  • 1

rno-piR-49961 Sequence
Based on genomic context


TGTAGAGACTTCCTGTCTTGGTGCAGCCC

rno-piR-49961 Aliases

In this section we provide all access alias for this piRNA in other databases. It is usual that databases store the same sequences of RNAs, but using different accession codes and identification. The association of a piRNA on our database and on another database is made by the comparison of the base sequence. Now, we have alias for piRNAs stored on the following databases: NCBI, ENA, piRNABank, piRBase, piRNAQuest and RNAdb.

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DQ616959.1 piR-84071 piR-rno-53025 rat_piRNA_50186 rno_piR_006939 URS00004AFB16

No rno-piR-49961 Expression Found to Draw the Box Plot!

None rno-piR-49961 Genomic Feature(s) Found to Draw the Cloud!

None rno-piR-49961 Target Site(s) Found to Draw the Cloud!

None rno-piR-49961 Target Gene Ontology Terms Found!

rno-piR-49961 Feedback

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rno-piR-49961 Dataset

In this section we provide information related to the dataset where this piRNA was found. If there is more than on item available, it means that this piRNA was found in more than one project. It is important to cite and give credits to all the authors that have found this RNA sequence.

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Reference Methods Tissue
16751776 Immunoprecipitation testis

rno-piR-49961 Reference

Provide information related to the published papers that use this piRNA. It is different to the "Dataset" section above because any paper that uses this piRNA, like evaluating the expression, mutation or variation, may be displayed here.

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  • Title
  • A germline-specific class of small RNAs binds mammalian Piwi proteins.
  • Journal
  • Nature - 2006
  • Author
  • Girard A; Sachidanandam R; Hannon GJ; Carmell MA
  • Pubmed
  • 16751776

piRNA Database version 1.8.0

MOC - Molecular Oncology Center

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