PIWI-interacting RNA (piRNA) Database - piRNAdb

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piRNA: rno-piR-49622

  • Accession:
  • rno-piR-49622
  • Organism Name:
  • Rattus norvegicus
  • Sequence Length:
  • 29
  • Alignments to rn6:
  • 1
  • Community Agree / Disagree:
  • 0 / 0
  • Community Comments:
  • 0
  • Datasets Found:
  • 1
  • Papers Describing:
  • 1

rno-piR-49622 Sequence
Based on genomic context


TGTCTAAACGGGATTAAAGACTGAGCCTC

rno-piR-49622 Aliases

In this section we provide all access alias for this piRNA in other databases. It is usual that databases store the same sequences of RNAs, but using different accession codes and identification. The association of a piRNA on our database and on another database is made by the comparison of the base sequence. Now, we have alias for piRNAs stored on the following databases: NCBI, ENA, piRNABank, piRBase, piRNAQuest and RNAdb.

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DQ617340.1 piR-84452 piR-rno-53338 rat_piRNA_49805 rno_piR_007138 URS000000ECB1

No rno-piR-49622 Expression Found to Draw the Box Plot!

None rno-piR-49622 Genomic Feature(s) Found to Draw the Cloud!

None rno-piR-49622 Target Site(s) Found to Draw the Cloud!

None rno-piR-49622 Target Gene Ontology Terms Found!

rno-piR-49622 Feedback

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rno-piR-49622 Dataset

In this section we provide information related to the dataset where this piRNA was found. If there is more than on item available, it means that this piRNA was found in more than one project. It is important to cite and give credits to all the authors that have found this RNA sequence.

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Reference Methods Tissue
16751776 Immunoprecipitation testis

rno-piR-49622 Reference

Provide information related to the published papers that use this piRNA. It is different to the "Dataset" section above because any paper that uses this piRNA, like evaluating the expression, mutation or variation, may be displayed here.

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  • Title
  • A germline-specific class of small RNAs binds mammalian Piwi proteins.
  • Journal
  • Nature - 2006
  • Author
  • Girard A; Sachidanandam R; Hannon GJ; Carmell MA
  • Pubmed
  • 16751776

piRNA Database version 1.8.0

MOC - Molecular Oncology Center

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