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You are trying to access: rat_piRNA_17649
This access code belongs to another piRNA database. On piRNAdb we use the following access code: rno-piR-17649

This feature of piRNAdb have the major objective to make easier to access the piRNA information. It provides the automatic translation of different piRNA alias from other databases to the code that we use on piRNAdb and provide the redirection to the piRNA information page.

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piRNA: rno-piR-17649

  • Accession:
  • rno-piR-17649
  • Organism Name:
  • Rattus norvegicus
  • Sequence Length:
  • 26
  • Alignments to rn6:
  • 1
  • Community Agree / Disagree:
  • 0 / 0
  • Community Comments:
  • 0
  • Datasets Found:
  • 1
  • Papers Describing:
  • 1

rno-piR-17649 Sequence
Based on genomic context


TGGCATAGAAGATTTGGGAGTAAAGT

rno-piR-17649 Aliases

In this section we provide all access alias for this piRNA in other databases. It is usual that databases store the same sequences of RNAs, but using different accession codes and identification. The association of a piRNA on our database and on another database is made by the comparison of the base sequence. Now, we have alias for piRNAs stored on the following databases: NCBI, ENA, piRNABank, piRBase, piRNAQuest and RNAdb.

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DQ749103.1 piR-164425 piR-rno-21802 rat_piRNA_17649 rno_piR_026103 URS0000316FC7

No rno-piR-17649 Expression Found to Draw the Box Plot!

None rno-piR-17649 Genomic Feature(s) Found to Draw the Cloud!

None rno-piR-17649 Target Site(s) Found to Draw the Cloud!

None rno-piR-17649 Target Gene Ontology Terms Found!

rno-piR-17649 Feedback

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More important than just use the information provided, here the piRNA enthuast user and the researcher are able to provide their opinion about this specific piRNA. Is provided a form to write your comments and a simplified pool. This feature was developed to increase the connection and integration of different or equal opinions about this specific piRNA.

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rno-piR-17649 Dataset

In this section we provide information related to the dataset where this piRNA was found. If there is more than on item available, it means that this piRNA was found in more than one project. It is important to cite and give credits to all the authors that have found this RNA sequence.

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Reference Methods Tissue
16778019 small RNA-seq testis

rno-piR-17649 Reference

Provide information related to the published papers that use this piRNA. It is different to the "Dataset" section above because any paper that uses this piRNA, like evaluating the expression, mutation or variation, may be displayed here.

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  • Title
  • Characterization of the piRNA complex from rat testes
  • Journal
  • Science - 2006
  • Author
  • Lau NC; Seto AG; Kim J; Kuramochi-Miyagawa S; Nakano T; Bartel DP; Kingston RE
  • Pubmed
  • 16778019

piRNA Database version 1.8.0

MOC - Molecular Oncology Center

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