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You are trying to access: piR-172872
This access code belongs to another piRNA database. On piRNAdb we use the following access code: rno-piR-9438

This feature of piRNAdb have the major objective to make easier to access the piRNA information. It provides the automatic translation of different piRNA alias from other databases to the code that we use on piRNAdb and provide the redirection to the piRNA information page.

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piRNA: rno-piR-9438

  • Accession:
  • rno-piR-9438
  • Organism Name:
  • Rattus norvegicus
  • Sequence Length:
  • 30
  • Alignments to rn6:
  • 1
  • Community Agree / Disagree:
  • 0 / 0
  • Community Comments:
  • 0
  • Datasets Found:
  • 1
  • Papers Describing:
  • 1

rno-piR-9438 Sequence
Based on genomic context


TAGCTTCTGTGTTACTCATATCCAGTAGCT

rno-piR-9438 Aliases

In this section we provide all access alias for this piRNA in other databases. It is usual that databases store the same sequences of RNAs, but using different accession codes and identification. The association of a piRNA on our database and on another database is made by the comparison of the base sequence. Now, we have alias for piRNAs stored on the following databases: NCBI, ENA, piRNABank, piRBase, piRNAQuest and RNAdb.

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DQ757550.1 piR-172872 piR-rno-30150 rat_piRNA_9438 rno_piR_031725 URS00003C8D2B

No rno-piR-9438 Expression Found to Draw the Box Plot!

None rno-piR-9438 Genomic Feature(s) Found to Draw the Cloud!

None rno-piR-9438 Target Site(s) Found to Draw the Cloud!

None rno-piR-9438 Target Gene Ontology Terms Found!

rno-piR-9438 Feedback

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rno-piR-9438 Dataset

In this section we provide information related to the dataset where this piRNA was found. If there is more than on item available, it means that this piRNA was found in more than one project. It is important to cite and give credits to all the authors that have found this RNA sequence.

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Reference Methods Tissue
16778019 small RNA-seq testis

rno-piR-9438 Reference

Provide information related to the published papers that use this piRNA. It is different to the "Dataset" section above because any paper that uses this piRNA, like evaluating the expression, mutation or variation, may be displayed here.

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  • Title
  • Characterization of the piRNA complex from rat testes
  • Journal
  • Science - 2006
  • Author
  • Lau NC; Seto AG; Kim J; Kuramochi-Miyagawa S; Nakano T; Bartel DP; Kingston RE
  • Pubmed
  • 16778019

piRNA Database version 1.8.0

MOC - Molecular Oncology Center

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