PIWI-interacting RNA (piRNA) Database - piRNAdb

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You are trying to access: URS000043B41D
This access code belongs to another piRNA database. On piRNAdb we use the following access code: rno-piR-52378

This feature of piRNAdb have the major objective to make easier to access the piRNA information. It provides the automatic translation of different piRNA alias from other databases to the code that we use on piRNAdb and provide the redirection to the piRNA information page.

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piRNA: rno-piR-52378

  • Accession:
  • rno-piR-52378
  • Organism Name:
  • Rattus norvegicus
  • Sequence Length:
  • 31
  • Alignments to rn6:
  • 1
  • Community Agree / Disagree:
  • 0 / 0
  • Community Comments:
  • 0
  • Datasets Found:
  • 1
  • Papers Describing:
  • 1

rno-piR-52378 Sequence
Based on genomic context


GCCCTTGATGTATAAGAGGCAGCCTGTGCAC

rno-piR-52378 Aliases

In this section we provide all access alias for this piRNA in other databases. It is usual that databases store the same sequences of RNAs, but using different accession codes and identification. The association of a piRNA on our database and on another database is made by the comparison of the base sequence. Now, we have alias for piRNAs stored on the following databases: NCBI, ENA, piRNABank, piRBase, piRNAQuest and RNAdb.

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DQ614100.1 piR-64212 piR-rno-50578 rat_piRNA_54617 rno_piR_005603 URS000043B41D

No rno-piR-52378 Expression Found to Draw the Box Plot!

None rno-piR-52378 Genomic Feature(s) Found to Draw the Cloud!

None rno-piR-52378 Target Site(s) Found to Draw the Cloud!

None rno-piR-52378 Target Gene Ontology Terms Found!

rno-piR-52378 Feedback

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More important than just use the information provided, here the piRNA enthuast user and the researcher are able to provide their opinion about this specific piRNA. Is provided a form to write your comments and a simplified pool. This feature was developed to increase the connection and integration of different or equal opinions about this specific piRNA.

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rno-piR-52378 Dataset

In this section we provide information related to the dataset where this piRNA was found. If there is more than on item available, it means that this piRNA was found in more than one project. It is important to cite and give credits to all the authors that have found this RNA sequence.

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Reference Methods Tissue
16751776 Immunoprecipitation testis

rno-piR-52378 Reference

Provide information related to the published papers that use this piRNA. It is different to the "Dataset" section above because any paper that uses this piRNA, like evaluating the expression, mutation or variation, may be displayed here.

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  • Title
  • A germline-specific class of small RNAs binds mammalian Piwi proteins.
  • Journal
  • Nature - 2006
  • Author
  • Girard A; Sachidanandam R; Hannon GJ; Carmell MA
  • Pubmed
  • 16751776

piRNA Database version 1.8.0

MOC - Molecular Oncology Center

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