PIWI-interacting RNA (piRNA) Database - piRNAdb

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You are trying to access: URS00001F381E
This access code belongs to another piRNA database. On piRNAdb we use the following access code: rno-piR-54126

This feature of piRNAdb have the major objective to make easier to access the piRNA information. It provides the automatic translation of different piRNA alias from other databases to the code that we use on piRNAdb and provide the redirection to the piRNA information page.

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piRNA: rno-piR-54126

  • Accession:
  • rno-piR-54126
  • Organism Name:
  • Rattus norvegicus
  • Sequence Length:
  • 31
  • Alignments to rn6:
  • 1
  • Community Agree / Disagree:
  • 0 / 0
  • Community Comments:
  • 0
  • Datasets Found:
  • 1
  • Papers Describing:
  • 1

rno-piR-54126 Sequence
Based on genomic context


TGCTCCTCACTCCTGTCAGTGAAATGGTCCC

rno-piR-54126 Aliases

In this section we provide all access alias for this piRNA in other databases. It is usual that databases store the same sequences of RNAs, but using different accession codes and identification. The association of a piRNA on our database and on another database is made by the comparison of the base sequence. Now, we have alias for piRNAs stored on the following databases: NCBI, ENA, piRNABank, piRBase, piRNAQuest and RNAdb.

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DQ612051.1 piR-80163 piR-rno-48779 rat_piRNA_56666 rno_piR_004658 URS00001F381E

No rno-piR-54126 Expression Found to Draw the Box Plot!

None rno-piR-54126 Genomic Feature(s) Found to Draw the Cloud!

None rno-piR-54126 Target Site(s) Found to Draw the Cloud!

None rno-piR-54126 Target Gene Ontology Terms Found!

rno-piR-54126 Feedback

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rno-piR-54126 Dataset

In this section we provide information related to the dataset where this piRNA was found. If there is more than on item available, it means that this piRNA was found in more than one project. It is important to cite and give credits to all the authors that have found this RNA sequence.

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Reference Methods Tissue
16751776 Immunoprecipitation testis

rno-piR-54126 Reference

Provide information related to the published papers that use this piRNA. It is different to the "Dataset" section above because any paper that uses this piRNA, like evaluating the expression, mutation or variation, may be displayed here.

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  • Title
  • A germline-specific class of small RNAs binds mammalian Piwi proteins.
  • Journal
  • Nature - 2006
  • Author
  • Girard A; Sachidanandam R; Hannon GJ; Carmell MA
  • Pubmed
  • 16751776

piRNA Database version 1.8.0

MOC - Molecular Oncology Center

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