PIWI-interacting RNA (piRNA) Database - piRNAdb

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You are trying to access: piR-16892
This access code belongs to another piRNA database. On piRNAdb we use the following access code: mmu-piR-40695

This feature of piRNAdb have the major objective to make easier to access the piRNA information. It provides the automatic translation of different piRNA alias from other databases to the code that we use on piRNAdb and provide the redirection to the piRNA information page.

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piRNA: mmu-piR-40695

  • Accession:
  • mmu-piR-40695
  • Organism Name:
  • Mus musculus
  • Sequence Length:
  • 30
  • Alignments to mm10:
  • 1
  • Community Agree / Disagree:
  • 0 / 0
  • Community Comments:
  • 0
  • Datasets Found:
  • 2
  • Papers Describing:
  • 2

mmu-piR-40695 Sequence
Based on genomic context


TGCAACGTATCTTAAATGCTGATTGACGGA

mmu-piR-40695 Aliases

In this section we provide all access alias for this piRNA in other databases. It is usual that databases store the same sequences of RNAs, but using different accession codes and identification. The association of a piRNA on our database and on another database is made by the comparison of the base sequence. Now, we have alias for piRNAs stored on the following databases: NCBI, ENA, piRNABank, piRBase, piRNAQuest and RNAdb.

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DQ548780.1 DQ686706.1 mmu_piRNA_24971 piR-16892 piR-mmu-15974 URS00001670A8

No mmu-piR-40695 Expression Found to Draw the Box Plot!

None mmu-piR-40695 Genomic Feature(s) Found to Draw the Cloud!

None mmu-piR-40695 Target Site(s) Found to Draw the Cloud!

None mmu-piR-40695 Target Gene Ontology Terms Found!

mmu-piR-40695 Feedback

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mmu-piR-40695 Dataset

In this section we provide information related to the dataset where this piRNA was found. If there is more than on item available, it means that this piRNA was found in more than one project. It is important to cite and give credits to all the authors that have found this RNA sequence.

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Reference Methods Tissue
16751776 Immunoprecipitation testis
16778019 small RNA-seq testis

mmu-piR-40695 Reference

Provide information related to the published papers that use this piRNA. It is different to the "Dataset" section above because any paper that uses this piRNA, like evaluating the expression, mutation or variation, may be displayed here.

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  • Title
  • A germline-specific class of small RNAs binds mammalian Piwi proteins.
  • Journal
  • Nature - 2006
  • Author
  • Girard A; Sachidanandam R; Hannon GJ; Carmell MA
  • Pubmed
  • 16751776
  • Title
  • Characterization of the piRNA complex from rat testes
  • Journal
  • Science - 2006
  • Author
  • Lau NC; Seto AG; Kim J; Kuramochi-Miyagawa S; Nakano T; Bartel DP; Kingston RE
  • Pubmed
  • 16778019

piRNA Database version 1.8.0

MOC - Molecular Oncology Center

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