PIWI-interacting RNA (piRNA) Database - piRNAdb

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You are trying to access: mmu_piRNA_20455
This access code belongs to another piRNA database. On piRNAdb we use the following access code: mmu-piR-24600

This feature of piRNAdb have the major objective to make easier to access the piRNA information. It provides the automatic translation of different piRNA alias from other databases to the code that we use on piRNAdb and provide the redirection to the piRNA information page.

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piRNA: mmu-piR-24600

  • Accession:
  • mmu-piR-24600
  • Organism Name:
  • Mus musculus
  • Sequence Length:
  • 29
  • Alignments to mm10:
  • 1
  • Community Agree / Disagree:
  • 0 / 0
  • Community Comments:
  • 0
  • Datasets Found:
  • 2
  • Papers Describing:
  • 2

mmu-piR-24600 Sequence
Based on genomic context


TACTAAGGTGCTTAAGAAGTTTGGTATGT

mmu-piR-24600 Aliases

In this section we provide all access alias for this piRNA in other databases. It is usual that databases store the same sequences of RNAs, but using different accession codes and identification. The association of a piRNA on our database and on another database is made by the comparison of the base sequence. Now, we have alias for piRNAs stored on the following databases: NCBI, ENA, piRNABank, piRBase, piRNAQuest and RNAdb.

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DQ565225.1 DQ702801.1 mmu_piRNA_20455 piR-118123 piR-mmu-33086 URS000024D01E

No mmu-piR-24600 Expression Found to Draw the Box Plot!

None mmu-piR-24600 Genomic Feature(s) Found to Draw the Cloud!

None mmu-piR-24600 Target Site(s) Found to Draw the Cloud!

None mmu-piR-24600 Target Gene Ontology Terms Found!

mmu-piR-24600 Feedback

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mmu-piR-24600 Dataset

In this section we provide information related to the dataset where this piRNA was found. If there is more than on item available, it means that this piRNA was found in more than one project. It is important to cite and give credits to all the authors that have found this RNA sequence.

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Reference Methods Tissue
16751776 Immunoprecipitation testis
16778019 small RNA-seq testis

mmu-piR-24600 Reference

Provide information related to the published papers that use this piRNA. It is different to the "Dataset" section above because any paper that uses this piRNA, like evaluating the expression, mutation or variation, may be displayed here.

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  • Title
  • A germline-specific class of small RNAs binds mammalian Piwi proteins.
  • Journal
  • Nature - 2006
  • Author
  • Girard A; Sachidanandam R; Hannon GJ; Carmell MA
  • Pubmed
  • 16751776
  • Title
  • Characterization of the piRNA complex from rat testes
  • Journal
  • Science - 2006
  • Author
  • Lau NC; Seto AG; Kim J; Kuramochi-Miyagawa S; Nakano T; Bartel DP; Kingston RE
  • Pubmed
  • 16778019

piRNA Database version 1.8.0

MOC - Molecular Oncology Center

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