PIWI-interacting RNA (piRNA) Database - piRNAdb

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You are trying to access: URS000061345C
This access code belongs to another piRNA database. On piRNAdb we use the following access code: cgr-piR-23899

This feature of piRNAdb have the major objective to make easier to access the piRNA information. It provides the automatic translation of different piRNA alias from other databases to the code that we use on piRNAdb and provide the redirection to the piRNA information page.

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piRNA: cgr-piR-23899

  • Accession:
  • cgr-piR-23899
  • Organism Name:
  • Cricetulus griseus
  • Sequence Length:
  • 28
  • Alignments to crigri1:
  • 2
  • Community Agree / Disagree:
  • 0 / 0
  • Community Comments:
  • 0
  • Datasets Found:
  • 1
  • Papers Describing:
  • 1

cgr-piR-23899 Sequence
Based on genomic context


TGTAATTGTATTGTCAGAAGAGACTCAT

cgr-piR-23899 Aliases

In this section we provide all access alias for this piRNA in other databases. It is usual that databases store the same sequences of RNAs, but using different accession codes and identification. The association of a piRNA on our database and on another database is made by the comparison of the base sequence. Now, we have alias for piRNAs stored on the following databases: NCBI, ENA, piRNABank, piRBase, piRNAQuest and RNAdb.

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cgr_piR_001728 KC636051.1 URS000061345C

No cgr-piR-23899 Expression Found to Draw the Box Plot!

None cgr-piR-23899 Genomic Feature(s) Found to Draw the Cloud!

None cgr-piR-23899 Target Site(s) Found to Draw the Cloud!

None cgr-piR-23899 Target Gene Ontology Terms Found!

cgr-piR-23899 Feedback

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cgr-piR-23899 Dataset

In this section we provide information related to the dataset where this piRNA was found. If there is more than on item available, it means that this piRNA was found in more than one project. It is important to cite and give credits to all the authors that have found this RNA sequence.

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Reference Methods Tissue
23639388 small RNA-seq ovary

cgr-piR-23899 Reference

Provide information related to the published papers that use this piRNA. It is different to the "Dataset" section above because any paper that uses this piRNA, like evaluating the expression, mutation or variation, may be displayed here.

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  • Title
  • Prediction of transcribed PIWI-interacting RNAs from CHO RNAseq data
  • Journal
  • Journal of Biotechnology - 2013
  • Author
  • Gerstl MP; Hackl M; Graf AB; Borth N; Grillari J
  • Pubmed
  • 23639388

piRNA Database version 1.8.0

MOC - Molecular Oncology Center

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